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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916400.1_cds_XP_016466096.1_58986
CDS Infomation

[gene=LOC107788877] [db_xref=GeneID:107788877] [protein=GTP-binding protein TypA/BipA homolog] [protein_id=XP_016466096.1] [location=join(44382..44705,49656..49730,50525..50675,50771..50839,51017..51186,52272..52409,53024..53149,54082..54180,55742..55862,56027..56090,56496..56550,56640..56764,57890..57963,58754..58803,59470..59556,59905..59955,60031..60114,60474..60524,60847..60930)] [gbkey=CDS]
Sequence

ATGGTCGGTCCATTGCTTCGGTCTCTCTGGTCCACTACTAGAACCTCCTTCTCCTCTTCT
TCCCACTATTCCCGTATCAAATCCTCATCCTATGCTCGAGCTTTTTCCACCGCCACTGCC
ACCGCCACCGCTGTCGAGTCCGCCCCCGGCGGTGCCCTGGATCCTGGCCGCCTCAGGAAT
GTCGCGGTTATAGCTCACGTCGATCACGGCAAGACTACTCTCATGGATAGGCTCCTCCGC
CAGTGTGGCGCCGATATACCTCACGAGCGTGCCTTAGACTCTATTGACCTCGAAAGAGAG
CGCGGCATCACTATTGCTTCTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTTAAC
ATGGTGGACACTCCTGGACATGCGGATTTTGGTGGTGAAGTTGAGAGGGTTGTTGGGATG
GTTGAGGGAGCAGTACTAGTTGTTGATGCTGGTGAAGGTCCACTTGCTCAAACAAAATTC
GTTCTTGCCAAGGCCCTAAAATATGGTTTACGCCCTATTCTTCTTCTCAATAAAGTAGAC
AAACCTGCAGTGACTGAAGAGAGATGTAATGAAGTCGAGAGCCTTGTATTTGATCTTTTC
GCAAACCTTGGTGCTTCAGAGGAACAATTAGATTTTCCTGTTCTTTATGCCTCGGCGAAA
GAAGGATGGGCATCTTCCACATATACAAAATGTCCTAATGATGTGAAGGATATGTCACAC
TTGCTTGATGCAATTATTGGGCATGTTCCTCCTCCAAGTGCTAGCGTAGATGCCCCTTTC
CAGATGTTGGTTTCTATGATGGAGAAAGATCCTTACCTTGGTCGTGTTTTGACGGGCCGT
GTATCTTATGGAGTTGTTCGTGTGGGTGATAGAGTACATGGGCTTAAGAAGACAGAAGAT
GGAACTGTAAAACTTGAAGAAGGAAAGATTGTAAAGCTGATGAAAAAGAAGGGTATGAGA
GCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTATCGATGGCAGGGTTGTCAAGT
CCGACAATTGGGCACACAGTTGCAAATGTGGAGGTTATGACAGCATTACCTACTGTTGTG
CTTGATCCCCCTACCATCTCCATGACTTTTGGTGTCAATGATTCTCCCTTGGCTGGTTCT
GATGGTATTCATTTGACTGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAAGCAGAAACA
AATCTCGCCATAAATGTTCTCCCCAGTACATCAGAATCATATGAAGTGCAGGGTAGAGGT
GAACTCCAATTAGGCATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTC
TCCCCACCTAAAGTCATGTACAAAGTAGAGAAAGGCGTGAAGCTTGAGCCAATTGAAGAA
GTGACTATTGAGGTTGATGACGAGCATGTAGGTTTGGTCATGGAAGCACTTTCTCACAGG
CGGGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAACACGGGAAGGACTAGAATGTGT
CTTACATGTCCTTCAAGAGGGCTAGTTGGCTATAGAAGTGTGTTCAGCAGTGACACCCGT
GGCGCTGGATTTATGCACCGGGCATTTCTAACTTATGAAAAATATCGTGGTCCTCTTGGA
AATGTCAGGAAAGGAGTACTAGTATCAATGGGCCGCGGGTTAATCACTGCTCATGCTCTT
ATGAATTTAGAAGCTCGTGGAATTCTCTTTGTGGCTCCTGGGATGGAGACATACGATGGC
ATGATTATTGGAGAGCATTCTCGAGATACCGATCTTGATGTCAACCCAGTTAGGACAAAA
GAACTCACAAATGTAAGGGCTGCTTGCAAGGATGAGAATGTGAGGTTAACTCCTCCCCGC
CTTATGAGTCTTGAAGAAGCCATAGGATACGTTGCTTCGGATGAGCTTATTGAGGTTACG
CCAAAAGCCATTAGGCTAAGAAAGAGATACCTGGAAGTGAACAAAAGAAAGCAAATGAGC
AAGAGACCCAAGGATTGA

Peptide Sequence

PEP ID

XP_016466096.1
PEP Infomation

PREDICTED: GTP-binding protein TypA/BipA homolog [Nicotiana tabacum]
Sequence

MVGPLLRSLWSTTRTSFSSSSHYSRIKSSSYARAFSTATATATAVESAPGGALDPGRLRN
VAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSIDLERERGITIASKVTSISWKDKELN
MVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
KPAVTEERCNEVESLVFDLFANLGASEEQLDFPVLYASAKEGWASSTYTKCPNDVKDMSH
LLDAIIGHVPPPSASVDAPFQMLVSMMEKDPYLGRVLTGRVSYGVVRVGDRVHGLKKTED
GTVKLEEGKIVKLMKKKGMRADPVDSAGAGDIVSMAGLSSPTIGHTVANVEVMTALPTVV
LDPPTISMTFGVNDSPLAGSDGIHLTGGKIGDRLLAEAETNLAINVLPSTSESYEVQGRG
ELQLGILIENMRREGFELSVSPPKVMYKVEKGVKLEPIEEVTIEVDDEHVGLVMEALSHR
RGEVTDMGPVPGNTGRTRMCLTCPSRGLVGYRSVFSSDTRGAGFMHRAFLTYEKYRGPLG
NVRKGVLVSMGRGLITAHALMNLEARGILFVAPGMETYDGMIIGEHSRDTDLDVNPVRTK
ELTNVRAACKDENVRLTPPRLMSLEEAIGYVASDELIEVTPKAIRLRKRYLEVNKRKQMS
KRPKD

Transcript Sequence

Gene sequence data has not been registered.